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How Tiny Microbes Took a Big Bite Out of the Deepwater Horizon Oil Spill

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John Kessler and David Valentine in front of ground zero of the Deepwater Horizon Gulf Oil spill in June 2010. Behind the researchers are other vessels also responding to the Gulf oil spill.
John Kessler and David Valentine in front of ground zero of the Deepwater Horizon Gulf Oil spill in June 2010. Behind the researchers are other vessels also responding to the Gulf oil spill. (Image credit: John Kessler, Department of Oceanography, Texas A & M University)

This Behind the Scenes article was provided to LiveScience in partnership with the National Science Foundation.

Methane, a potent greenhouse gas, seeps naturally from the sea floor in many places around the planet, including in the Gulf of Mexico.

Scientists know that some of the Gulf's naturally released methane is eaten by microbes, but they are still trying to determine how much of this released methane ever reaches the atmosphere, where it may influence climate. To help better define the relationships between methane seeps and climate change, we had previously conducted many studies of natural methane seeps. However, not all marine methane seeps are natural; significant amounts of methane also seep from unnatural sources, such as oil wells. So when BP's Deepwater Horizon rig exploded in the Gulf of Mexico on April 20, 2010, and the Macondo prospect began releasing hydrocarbons, we suspected that the resulting oil spill would be accompanied by a large methane release.

A Mega Methane Release

Indeed, we were right. In fact, so much methane gushed from the well that some of it collected as solid, crystal-like structures — known as clathrate hydrates — in well caps that rig operators used in attempts to seal the well. Unfortunately, those accumulations of methane clathrate hydrate eventually filled the well caps, and thereby prevented them from sealing the well.

In addition, soon after the Deepwater Horizon rig exploded, the Department of Energy and BP collected measurements indicating that, on a molecule-by-molecule basis, methane was the most abundant material being released from the rig. With the rig spilling 52,700 barrels of oil per day into the Gulf, we now realized it was also releasing far more methane than any other previously studied natural methane seep.

As news of the rig's release of large amounts of methane spread throughout the scientific community and general public, a wave of wild speculation about its ultimate impacts grew.

For example, some people predicted that the methane would gradually and harmlessly rise into the atmosphere. Another prediction was that the methane would remain in the ocean, suffocate marine life and thereby produce large expanses of lifeless ocean (called dead zones). Some people even outlandishly predicted — much to the consternation of many residents of the Gulf coast — that a giant methane bubble would suddenly rise from the bottom of the Gulf and trigger a huge tidal wave.

Unfortunately, however, most speculation about the fate of the methane releases was grounded in baseless conjecture — not on any hard data. Such unsupported speculation reminds us of the famous quote by Lord Kelvin in 1883:

"I often say that when you can measure what you are speaking about, and express it in numbers, you know something about it; but when you cannot measure it, when you cannot express it in numbers, your knowledge is of a meager and unsatisfactory kind; it may be the beginning of knowledge, but you have scarcely in your thoughts advanced to the state of Science, whatever the matter may be."

Tracking Methane

As devoted investigators of methane, we wanted to learn what would really happen to the methane released by the Macondo prospect — both because of our interest in the relationships between methane releases and climate change and because of our concern for the Gulf's ecological health.

As scientists, we wanted to solve the methane mystery through the traditional scientific method. This would involve first developing an idea, called a hypothesis, based on an initial set of data on released methane and then conducting tests involving more data collection, which would either support or disprove our hypothesis.

Within weeks of the explosion, we received funding from the National Science Foundation to investigate the methane component of the oil spill. In June 2010, with only two weeks to prepare, we embarked on our first expedition to the oil spill, investigating methane while aboard a research vessel.

On that trip, we measured methane levels in the ocean by using winches to carefully lower electronic equipment overboard. The electronic equipment collected data and provided us with water samples from various depths that we could use to test for methane.

Using that method, we discovered giant horizontal plumes of methane and other gases that were located about two-thirds of a mile below the ocean surface and were about 110 to 220 yards (100 to 200 meters) thick.

The plumes contained concentrations of dissolved methane that were 10,000 to 100,000 times above normal levels, the highest methane concentrations ever documented in ocean waters.

In addition, we tested methane levels in and above the ocean surface in order to determine whether the gas was escaping into the atmosphere. Our results from those tests indicated that Macondo prospect methane was not being emitted to the atmosphere and was staying dissolved and suspended in the deep ocean.

In June 2010, we also measured the rates at which methane-eating microbes were consuming and thereby removing Macondo prospect methane from the Gulf waters. Although a few resulting measurements indicated that microbes were consuming methane rather quickly, the majority of measurements reflected slow rates of consumption or "biodegradation."

Because of that evidence of slow biodegradation of plume methane, together with the record-breaking nature of methane concentrations in the plumes, we hypothesized in June that the plumes of high methane concentrations would persist in the Gulf for years to come.

Surprising Story

Continuing to track the Gulf's methane levels, we led three additional surveys throughout the Gulf in August, September and October of 2010. Through those surveys, which were supported by the National Oceanic and Atmospheric Administration, we sampled 207 unique locations, and measured concentrations of dissolved methane and oxygen in thousands of samples from an area covering 36,000 square miles (about 93,000 square kilometers).

Surprisingly, our analyses of data generated through those later surveys told an entirely unanticipated story: rather than lasting years, as we had hypothesized, the high methane concentrations we had measured in June 2010 had hardly lasted months and were gone by fall 2010. By then, oxygen levels within the plumes had become slightly depleted.

Methane-eating microbes remove oxygen from the water as they breathe. Therefore, if microbes were consuming methane in the plumes, we would expect the plumes' methane and oxygen levels to drop — phenomena that were indeed reflected in the data collected from the plumes in the fall.

So we revised our hypothesis accordingly. We now hypothesized that at some time during the mid-to-late summer of 2010, the vast amounts of methane released from the Deepwater Horizon disaster had been almost entirely consumed by methane-eating microbes.

Putting Our New Hypothesis to the Test

To test our revised hypothesis, we conducted numerous types of tests, both at sea and in the laboratory. Unlike our original hypothesis which was disproved by such follow-up tests, our revised hypothesis was supported by all such tests, which included the following:

  • An exhaustive search for methane in, above, below and away from the plumes that involved measuring more than 650 water samples. We also continually sampled the atmosphere by taking more than 60,000 air measurements. Our results showed that none of our air or water measurements had elevated levels of methane.
  • Measurements of the total amount of oxygen that had been removed from the plumes. These analyses revealed that so much oxygen was missing from the plumes that its removal could only be explained by one phenomenon, that the microbes nearly totally consumed the vast amounts of methane that had been released by the Deepwater Horizon disaster.
  • Genetic analyses of microbes remaining in the plumes, which showed that the organisms were methane-eating microbes.
  • Mathematical calculations integrating data of ocean currents and our data on methane, oxygen and rates of methane consumption indicated that almost all of the Deepwater Horizon methane had been completely consumed around the beginning of August.

So what was the source of the massive populations of methane-munching microbes that had unexpectedly cleaned the plumes of methane and reduced the oxygen levels? The Gulf itself. After all, even before the Deepwater Horizon rig exploded, the Gulf had been dotted by many natural methane seeps that provided food for modest-sized populations of methane-eating microbes.

In response to the explosion and resulting releases of huge volumes of methane, the microbial populations seized the day, feasted on the methane releases and experienced large population increases. After ultimately eating themselves out of house and home, the large populations of methane-eating microbes eventually shrank.

So, if not for the presence in the Gulf of pre-explosion baseline populations of methane-eating microbes, the huge volume of methane released by the Deepwater Horizon disaster may have persisted far longer than it did. Because the volume of methane released from the Deepwater Horizon disaster was precedent-setting and had never before been observed, the rapid and mighty microbial response that it triggered had also never before been observed.

We were glad to have this opportunity to lend our expertise to study the oil spill. But we also tried to make a little good come from this disaster and to use it to learn something about how the planet naturally functions. What our research has taught us is that if some of the large stores of methane that are currently buried beneath the sea floor are ever released in large quantities — either due to ocean warming, earthquakes or man-made factors — locally present microbes may at least partially help to reduce the potential influences on climate.

Editor's Note: This research was supported by the National Science Foundation (NSF), the federal agency charged with funding basic research and education across all fields of science and engineering. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author and do not necessarily reflect the views of the National Science Foundation. See the Behind the Scenes Archive.